Data Exploration: Characterization of the
Groundwater resources of the Leona Aquifer
Term Project
GIS in Water Resources
Fall 2002
Lloyd Hemphill
Department of Geological Sciences
The
Motivation: Why should shallow
alluvial aquifers be studied?
Shallow alluvial aquifers are an
important but very fragile source of groundwater. Flat alluvial plains are the sites of both
agriculture and urban development which makes these aquifers a convenient
source of groundwater. Historically
alluvium has been a popular source of ground water because hand-dug wells did
not need to be very deep to reach water.
Shallow alluvial aquifers are also very abundant worldwide. One problem with these aquifers is the fact
that they are easily contaminated by numerous means. As a result, many have been abandoned for
deeper and better protected aquifers.
Even so, shallow aquifers should not be ignored because they are often
the recharge areas for deeper aquifers.
The Leona Aquifer in
Background
This project
deals with the Leona Formation as it occurs in
The Leona formation consists of
stratified gravels, sands, and clays.
These are Quaternary sediments eroded from the

Figure 1: Geologic
Map of the Leona Formation as it occurs in Hays and
Qle: Leona Formation; Kpg:
Pecan Gap Chalk; Kknm:
Navarro and Marlbrook Marl;
Emi:
Midway Group; Ewi: Wilcox
Group.
Project
Goals and Objectives
There
were many goals for this project. The
first goal was to learn to use GIS to gather information and begin to create a
picture of the character of the Leona Aquifer.
To do this the data needed to be put into a more useable format. Most of the well data was stored in multiple
ASCII text or .pdf files. The second goal of the project was to assess
the extent of existing data in space and time. This is helpful in determining what can be
done with existing data and where new data should be collected. The next goal was to use GIS to create a map
to aid in locating wells for future data collection. The last two goals of this project were to
examine spatial changes in water quality in the Leona aquifer and compare water
quality within the Leona Aquifer to that of surrounding aquifers.
Methods
Data
Acquisition
Several
different types of data were used for this project. Some of the data was taken from class
exercises used by the GIS for Groundwater Resources course, taught by Dr. David
Maidment of The University of Texas at
The following are the data used:
· A Digital Elevation Model (DEM) was
generated from the
National Elevation Dataset archive for
· The Hydrologic Unit Code (HUC)
coverage for
· HydroEdge.shp file prepared by Dr. Maidment from National Hydrography
Dataset data.
· Coverages of major roads and highways for Hays
and
· Well data was obtained from Texas
Water Development Board (TWDB) files.
This data included well locations (degrees, minutes, and seconds), water
levels, and water quality.
· Geology data was obtained from the
Bureau of Economic Geology Geologic Atlas Seguin
Sheet.
All
of this data except the DEM and the geologic map were added to a geodatabase as personal a geodatabase
feature classes. The raster data could not
be stored in the geodatabase.
Data
Processing
Well Data
The well data
from the TWDB required some processing before it could be used in ArcGIS. First, the
data was downloaded as ASCII tab delimited text files. Next, the data was opened using Excel and
saved as an Excel spreadsheet. The well
data was stored in three main tables:
Well data, Water Quality, and Water Levels. The most important information stored in the
Well data table is latitude and longitude of each well, the Aquifer code, and
the well depth. The Water Quality table
contained analyses of the major minor chemical constituents in the water and
the date in which it was collected. The
Water Levels table contained the depth to the water table from the land surface
datum and water level change since the last measurement. The elevation of the water table was
calculated by the following equation:
Water
Table elevation = (Elevation of land surface datum – depth to water).
All wells were identified by the state
well number in each of these tables. Selected
data, described later, was organized in an Excel spreadsheet and saved as a DBF
4 *.dbf file. This file was imported
into the geodatabase and then added to an ArcMap document.
Displaying Well as Points
To plot the wells on the map, I first
displayed the X, Y data (Longitude, Latitude) as an event. This event had an attribute table and showed
the location of the wells, but its versatility was limited. Next, this event was exported as a shapefile and added to the project as a layer. This new layer could be analyzed using tools
such as spatial analyst.
Five main
layers of well data were used in this project.
All of the wells used were in
DEM
For this
project, the DEM was primarily used to examine the topography and geomorphology
of the study area. A surface analysis
was conducted using the spatial analyst tool in ArcGIS. Contours and slopes were drawn from the DEM
to show the distinct topography of the Leona formation.

Figure
2: The surface analysis function.
Geologic Map Raster
The only
geology data available for the area was a paper copy of the Bureau of Economic
Geology Seguin Sheet.
No digital data was available. In
order to use the geologic map, the map was scanned and saved as a *.jpeg file
to save file space. Later, the map may
be stored as a higher resolution image.
This image file was opened in ArcCatalog and
the coordinate system was set to Universal Transverse Mercator
(UTM) Geographic Coordinate System using the North American Datum 1927. Next, this map was loaded into ArcMap. Since this
map was a scanned raster image, it contained no referencing information and needed
to be geo-referenced.
These are the steps used:
1. Zoomed into
a location where the coordinates were known (intersection of latitude and
longitude).
2. Clicked add
control point button on geo-referencing toolbar.
3. Clicked on
a single point twice.
4. Clicked
view link table button on geo-referencing toolbar.
The
link table contained X and Y coordinates for the
source (the unreferenced raster) and X and Y coordinates
for the map (the actual coordinates of the control point).
5. Changed the
X and Y values to the actual coordinates.
6. Repeated
process three times.
7. Rectify.
(This permanently attached the geo-referencing information to the image.)
This was
mainly done as a learning experience so only three control points were selected. To achieve the best map many more control
point should be added.
Spatial
Analysis
Water
Quality
Nitrate
and Chloride levels were examined in the Leona Formation and in the Wilcox
Group. One idea was to determine if the
water flowing from the Leona had any effect on the water quality in the
underlying Wilcox group. In order to
best view the spatial distribution of water quality, it was necessary to use
the spatial analyst tool to interpolate between data points and create a
raster. Water quality data from 1946 was
used. Both the inverse distance weighted
(IDW) and kriging methods were used.
Water
Levels
Water level
data from 1964 was used to create a potentiometric
surface for the Leona Aquifer. The
interpolation to raster was done using the kriging
method. Two points on the resulting
surface were used to calculate the hydraulic gradient between the northwest and
southeast ends of the aquifer.
Temporal
analysis
Excel
was used to plot graphs to illustrate changes over time. These graphs were connected to the spatial
analyses discussed above. This
juxtaposition of data allows data to be examined over both space and time. This method was used to look for trends in
chloride levels in the City of
Results
Topographic Analysis
The surface
analysis tools illustrated the unique topography of the Leona Formation. The Leona is a classic example of inverted
topography. The alluvium that became the
Leona was most likely deposited in a topographically low area. Modern drainage has cut down around the unit
and now it is a topographically high area.

Figure 3: DEM
and contours of the Leona Formation.
Light blue on the DEM represents
higher elevations.
The surface of
the Leona Formation forms a very flat plain.
The gradient between the two points located on figure 3 is 0.12
degrees. The very gentle topography is
also demonstrated by a slope analysis. (Figure 4)

Figure 4: Slope
analysis of the Leona Formation. Yellow
areas indicate very gentle slopes. The red dots are wells in the Leona Aquifer.
Nitrate
Distribution

Figure
5: 1946 Nitrate concentrations in mg/l
(as nitrate) in the Leona Aquifer.
IDW
interpolation of Nitrate in the Leona and Wilcox Aquifers highlighted a few
nitrate hotspots. The maximum
contaminant level for nitrate in drinking water is 44.27 mg/l as nitrate. (Explanation of TWDB Groundwater Database)
This means that the dark blue areas were suitable (in terms of nitrate) for drinking water in 1946. These interpolations may exaggerate some of
the higher concentration areas especially those based only on one data point. It may be unrealistic to assume that high
nitrate is found a kilometer or more away from the tested well.
Note the
nitrate hotspot southeast of Lockhart in Figure 5. Compare it to the high nitrate in found in
the same area in the underlying Wilcox Aquifer (Figure 6). This may be showing a plume of water that is
flowing out of the Leona into the Wilcox.

Figure
6: 1946 Nitrate concentrations in mg/l (as nitrate) in the Wilcox Aquifer.
Chloride
Distribution
IDW
interpolation of chloride data points shows similar areas with high chloride
concentration. Figure
7. Some of these are the same
wells that had high nitrate levels.
Chloride is not a health risk; therefore it does not have a maximum
contaminant level. Water does begin to
become unpleasant to drink when the chloride concentration is more than 250
mg/l. This threshold is called the
secondary maximum contaminate level.(ABAG, 1997) As before, the blue areas have the best
drinking water in terms of chloride concentration.

Figure
7: 1946
Chloride concentrations in mg/l in the Leona Aquifer.
Excel graphs
of Chloride concentration plotted over time show some interesting trends. Figure 8. In the
early 1940’s Chloride levels were high but have decreased over time. Note that the graphs preserve the relative
proportions of chloride that are shown in the spatial data. One possible explanation for the high
chloride levels is the improper disposal of oil brines in the 1940’s.

Figure
8: Chloride
level changes over time in the Leona Aquifer,
Leona
Water Table

Figure
9: Water Table in the Leona Aquifer in
1964.
Krige interpolation of water levels shows that the water
table in the Leona Aquifer strongly mimics the surface topography. (Figure
9) Higher hydraulic head is found to the
northwest and lower head to the southeast.
The slope of the water table is 0.15 degrees which is nearly the same as
the slope of the land surface.
Groundwater should flow down this slight gradient toward the southeast. The krige does not
illustrate water level changes in the north-south direction. Groundwater likely also flows toward the
north and south margins of the unit.
Water level
fluctuations in the Leona are shown by the graphs in figure 10. The eastern well shows about 12 feet of
change and the other shows about 11 feet of change overall. This is important to notice when you consider
that the wells are 29 ft and 14 ft deep respectively.

Figure
10: Water level fluctuations in the
Leona Aquifer.
Geologic
Map

Figure 11. Geo-referenced geologic map of the Leona Formation. The blue dots are wells in the Leona Formation.
Problems
A
few problems were encountered in this project that need more work. The first problem was with the TxDOT highway data.
Even when the same projection was set, the orientation of the data for
different counties did not match each other.
The second item deals with the well locations. There has been no ground truthing
done to determine how accurately the wells are plotted on the map. Most of the Leona Aquifer wells are in the
area mapped as the Leona Formation on the geologic map so the locations are
approximately correct.
Future
Work
There
are a couple other tasks that could be done in the future. Land use data could be added to the database
and used to determine possible sources of contaminants. It would also be useful to gather
precipitation data to compare with the water level changes in the Leona
Aquifer. Another possibility is to digitize
a polygon around the Leona Formation and calculate the area which could be used
in future modeling.
References:
ABAG Environmental Help line, 1997
http://www.abag.ca.gov/govnet/environmental_help/answers/112.html
Explanation of TWDB Groundwater Database
(http://www.twdb.state.tx.us/data/waterwell/groundwaterexplanation.htm)
Follett, C.R., 1966, Groundwater resources of Caldwell
County, Texas: Texas Water Development Board: Report 12.